Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12335.1Protein EthA. (411 aa)    
Predicted Functional Partners:
AKU12636.1
Ferredoxin protein.
 
 0.991
AKU12336.1
Hypothetical protein.
 
 
 0.983
AKU14308.1
TodB.
 
 0.918
AKU12659.1
2Fe-2S type ferredoxin protein.
  
 
 0.914
AKU10649.1
Assimilatory nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 0.896
AKU12338.1
Dioxygenase DitA oxygenase component small subunit.
 
 
 0.821
AKU12339.1
Protein DitA1.
 
 
 0.820
AKU12311.1
Hypothetical protein.
 
 
 0.720
AKU12312.1
Aromatic-ring-hydroxylating dioxygenase subunit beta.
 
 
 0.720
AKU14311.1
Biphenyl dioxygenase subunit alpha.
 
 0.713
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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