Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12336.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
AKU12335.1
Protein EthA.
 
 
 0.983
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
  
 0.954
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
  
 0.954
AKU12659.1
2Fe-2S type ferredoxin protein.
  
  
  0.928
AKU11159.1
2-ketoglutarate NADP oxidoreductase, gamma subunit.
  
 0.924
bzdV
BzdV.
    
 0.917
hscB
Co-chaperone; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.
 
  
 0.859
AKU12663.1
Scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
 
 0.851
AKU12658.1
Hypothetical protein.
  
  
 0.847
AKU11689.1
NifU-like protein.
  
 0.824
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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