STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12339.1Protein DitA1. (464 aa)    
Predicted Functional Partners:
AKU12338.1
Dioxygenase DitA oxygenase component small subunit.
 
 0.982
AKU12312.1
Aromatic-ring-hydroxylating dioxygenase subunit beta.
 
 0.952
AKU14310.1
TodC2.
  
 0.800
AKU12336.1
Hypothetical protein.
 
  
 0.725
AKU12348.1
Protein DitC.
 
   
 0.722
AKU12335.1
Protein EthA.
 
 0.698
AKU12317.1
Hypothetical protein.
  
     0.636
AKU14305.1
3-isopropylcatechol-2,3-dioxygenase.
 
   
 0.630
AKU12436.1
Protein DitP.
  
   
 0.626
AKU12429.1
Cytochrome P450.
 
  
 0.588
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.