Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKU12340.1Protein DitH. (328 aa)    
Predicted Functional Partners:
AKU12341.1
Dehydrogenase/reductase DitG, short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.582
AKU12339.1
Protein DitA1.
 
   
 0.558
AKU12342.1
Hypothetical protein.
 
    0.546
AKU12343.1
Hypothetical protein.
 
  
 0.541
AKU12338.1
Dioxygenase DitA oxygenase component small subunit.
 
   
 0.512
AKU12337.1
Hypothetical protein.
 
     0.427
AKU13064.1
Glutathione S transferase protein.
  
 
 0.414
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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