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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12345.1IclR family transcriptional regulator. (262 aa)    
Predicted Functional Partners:
AKU12806.1
Transcriptional regulator.
  
     0.629
AKU14195.1
Transcriptional regulatory protein.
  
     0.602
AKU12343.1
Hypothetical protein.
 
  
 0.561
AKU12346.1
Ferredoxin.
 
   
 0.561
AKU12342.1
Hypothetical protein.
 
     0.536
AKU14312.1
GntR family transcriptional regulator.
  
  
 0.501
AKU13231.1
Transcriptional regulator, GntR family.
 
  
 0.483
AKU12344.1
Hypothetical protein.
       0.429
AKU12317.1
Hypothetical protein.
 
   
 0.416
AKU12347.1
DitB.
  
  
 0.413
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.