Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU12365.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
AKU12364.1
Putative enoyl-CoA hydratase.
       0.517
AKU12366.1
Oxidoreductase, short-chain dehydrogenase/reductase family protein.
     
 0.473
AKU11772.1
Putative iron binding protein component of ABC iron transporter.
  
  
 0.458
AKU14604.1
Extracellular solute-binding protein family 1.
  
  
 0.458
AKU12367.1
Short-chain dehydrogenase/reductase SDR.
     
 0.417
AKU12363.1
acyl-CoA dehydrogenase.
     
 0.401
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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