Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12380.1Transposase. (115 aa)    
Predicted Functional Partners:
AKU12379.1
Transposase IS66.
 
     0.904
AKU12381.1
Transposase IS3/IS911 family protein.
  
  
 0.781
AKU11350.1
Transposase IS66.
 
     0.778
AKU13082.1
Transposase IS66.
 
     0.778
AKU13139.1
Transposase IS66.
 
     0.778
AKU14274.1
Transposase IS66.
 
     0.778
AKU14297.1
Transposase IS66.
 
     0.778
AKU12382.1
Hypothetical protein.
       0.465
AKU12383.1
Hypothetical protein.
       0.465
AKU12378.1
Hypothetical protein.
       0.426
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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