Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU12392.1Alcohol dehydrogenase. (335 aa)    
Predicted Functional Partners:
AKU12391.1
Alcohol dehydrogenase.
 
    
0.776
AKU12388.1
2,4-dienoyl-CoA reductase.
 
 
 0.678
AKU12390.1
MmgE/PrpD family.
 
    0.672
AKU12389.1
enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
   0.662
AKU12394.1
AMP-dependent synthetase and ligase.
  
  
 0.653
AKU12393.1
Butyryl-CoA dehydrogenase.
  
    0.640
AKU12370.1
Aminoglycoside phosphotransferase.
 
    0.636
AKU12206.1
NAD(P)H quinone oxidoreductase.
 
 
 0.629
AKU12432.1
Putative phosphotransferase.
 
    0.628
AKU12361.1
Aminoglycoside phosphotransferase.
 
    0.615
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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