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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12401.1Hypothetical protein. (595 aa)    
Predicted Functional Partners:
AKU12402.1
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase.
 
 0.821
AKU12400.1
acyl-CoA dehydrogenase.
 
  
 0.766
AKU12404.1
Short-chain dehydrogenase/reductase SDR.
 
  
 0.685
AKU13067.1
methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
  
  
 0.681
AKU13983.1
propionyl-CoA carboxylase beta chain, mitochondrial precursor.
  
  
 0.681
AKU12403.1
3-oxoacyl-ACP reductase.
  
  
 0.629
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
     
 0.605
AKU12069.1
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.599
AKU12399.1
Hypothetical protein.
       0.579
AKU12405.1
enoyl-CoA hydratase/isomerase.
  
  
 0.570
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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