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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12428.1Amidohydrolase 2. (435 aa)    
Predicted Functional Partners:
AKU12426.1
Putative acyl-CoA dehydrogenase.
 
 
 0.774
AKU12342.1
Hypothetical protein.
 
     0.764
AKU12436.1
Protein DitP.
 
     0.757
AKU12429.1
Cytochrome P450.
 
  
 0.751
AKU11435.1
Hypothetical protein.
 
    0.741
AKU12343.1
Hypothetical protein.
  
   
 0.727
AKU12442.1
Protein DitK.
  
     0.725
AKU12332.1
DitK.
  
     0.718
AKU11393.1
Hypothetical protein.
  
     0.715
AKU12346.1
Ferredoxin.
  
     0.711
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.