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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12439.1Hypothetical protein; Belongs to the cytochrome P450 family. (424 aa)    
Predicted Functional Partners:
AKU10916.1
AMP-dependent synthetase and ligase.
  
 0.929
AKU13917.1
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
    
 0.879
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.873
AKU12336.1
Hypothetical protein.
 
 0.799
AKU13796.1
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 0.791
AKU11881.1
Hypothetical protein.
   
 0.766
AKU12659.1
2Fe-2S type ferredoxin protein.
  
 0.726
AKU12436.1
Protein DitP.
 
   
 0.705
AKU13247.1
Glycosyl transferase, UDP-glucuronosyltransferase-like protein.
  
 
 0.705
AKU10247.1
Ring-hydroxylation complex protein 4.
  
 0.704
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.