Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12463.1Hypothetical protein. (737 aa)    
Predicted Functional Partners:
AKU12464.1
Hypothetical protein.
 
     0.891
AKU12461.1
Hypothetical protein.
 
     0.867
AKU12459.1
Hypothetical protein.
 
   
 0.866
AKU12462.1
Hypothetical protein.
 
   
 0.851
AKU12472.1
Hypothetical protein.
 
  
 0.849
AKU12468.1
Hypothetical protein.
 
     0.833
AKU12469.1
Hypothetical protein.
 
     0.833
AKU12470.1
Hypothetical protein.
 
     0.833
AKU12471.1
Hypothetical protein.
 
     0.833
AKU12474.1
Hypothetical protein.
 
     0.819
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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