STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12495.1N-6 DNA methylase. (550 aa)    
Predicted Functional Partners:
AKU12494.1
Type I site-specific deoxyribonuclease.
 
  
 0.977
AKU12496.1
Type I restriction modification DNA specificity domain protein.
 
 0.977
AKU14276.1
Restriction endonuclease S subunit.
 
 0.954
AKU14278.1
HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.899
AKU14271.1
Restriction modification system DNA specificity domain-containing protein.
 
 0.893
AKU10530.1
Type I restriction enzyme EcoEI R protein.
 
 0.886
AKU11272.1
Type I restriction-modification system specificity subunit.
  
 0.854
AKU12493.1
Excisionase family DNA-binding protein.
       0.742
AKU14619.1
HsdR family type I site-specific deoxyribonuclease.
 
  
 0.734
AKU11449.1
Hypothetical protein.
  
 0.703
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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