Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKU12496.1Type I restriction modification DNA specificity domain protein. (345 aa)    
Predicted Functional Partners:
AKU12495.1
N-6 DNA methylase.
 
 0.977
AKU14270.1
N-6 DNA methylase.
 
 0.958
AKU14616.1
Adenine-specific DNA-methyltransferase.
 
 0.951
AKU10531.1
Type I restriction enzyme EcoEI M protein.
 
 0.944
AKU12494.1
Type I site-specific deoxyribonuclease.
 
  
 0.935
AKU14278.1
HsdR family type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.880
AKU14619.1
HsdR family type I site-specific deoxyribonuclease.
 
  
 0.845
AKU10530.1
Type I restriction enzyme EcoEI R protein.
 
 0.827
AKU12497.1
Uncharacterized protein yhcG.
       0.763
ruvB
Holliday junction DNA helicase B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
  
  
 0.675
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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