Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12530.1ferredoxin-NADP reductase. (258 aa)    
Predicted Functional Partners:
AKU12529.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.654
AKU10244.1
phenylacetate-CoA oxygenase subunit PaaB.
  
 
 0.584
AKU10245.1
Putative ring-hydroxylation complex protein 2.
  
 0.463
AKU10243.1
PaaA.
  
 0.449
boxB
Benzoyl-CoA oxygenase component B.
  
 0.449
AKU12531.1
Hypothetical protein.
       0.435
AKU12532.1
Hypothetical protein.
       0.435
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.