Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU12543.1Terpenoid synthase-related protein. (277 aa)    
Predicted Functional Partners:
AKU12545.1
Squalene/phytoene dehydrogenase.
 
  
 0.947
AKU12544.1
Squalene/phytoene synthase.
 
   
0.886
AKU12441.1
FAD dependent oxidoreductase.
 
  
 0.663
AKU12061.1
Multi anti extrusion protein MatE.
   
  
 0.643
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
  
 
  0.627
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
 
  0.619
AKU10525.1
D-erythrose 4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.607
AKU10756.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.607
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
  0.602
AKU12314.1
Phytoene dehydrogenase-like oxidoreductase.
 
  
 0.600
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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