Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12545.1Squalene/phytoene dehydrogenase. (436 aa)    
Predicted Functional Partners:
AKU12544.1
Squalene/phytoene synthase.
    0.966
AKU12543.1
Terpenoid synthase-related protein.
 
  
 0.947
AKU10826.1
Hypothetical protein.
  
     0.544
AKU12542.1
Diguanylate cyclase/phosphodiesterase.
       0.495
AKU12541.1
Hypothetical protein.
       0.486
AKU12986.1
Hypothetical protein.
  
     0.472
AKU11475.1
Hypothetical protein.
  
     0.426
AKU10342.1
Hypothetical protein.
  
     0.423
AKU13664.1
Hypothetical protein.
  
     0.415
AKU11966.1
K+-dependent Na+/Ca+ exchanger-like protein.
   
    0.405
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.