Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12552.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
AKU12551.1
Histidine kinase.
 
 
  0.886
AKU12553.1
ABC transporter.
 
 
 0.801
AKU12554.1
Hypothetical protein.
 
     0.775
AKU10887.1
Dihydrolipoamide dehydrogenase.
   
 0.676
AKU12550.1
Two-component, sigma-54 specific, transcriptional regulator, Fis family.
       0.660
AKU10916.1
AMP-dependent synthetase and ligase.
  
 
 0.613
AKU09933.1
Hypothetical protein.
  
     0.587
AKU11013.1
Hypothetical protein.
  
     0.585
AKU13965.1
Hypothetical protein.
  
     0.578
AKU12600.1
Hypothetical protein.
  
     0.571
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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