AKU12558.1 protein (Azoarcus sp. CIB) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AKU12558.1

Aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (282 aa)

Predicted Functional Partners:

glk

0.918

pgi

0.916

AKU10806.1

0.903

zwf

0.841

AKU11167.1

0.835

AKU13641.1

0.819

AKU10757.1

0.815

tal

0.806

AKU13328.1

0.806

AKU11166.1

0.803

Your Current Organism:

Azoarcus sp. CIB

NCBI taxonomy Id: 198107
Other names: A. sp. CIB

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKU10757.1	AKU10806.1	AzCIB_0852	AzCIB_0901	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Phosphoglucomutase.	0.929
AKU10757.1	AKU11166.1	AzCIB_0852	AzCIB_1261	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Aldehyde dehydrogenase.	0.835
AKU10757.1	AKU12558.1	AzCIB_0852	AzCIB_2665	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.	0.815
AKU10757.1	glk	AzCIB_0852	AzCIB_1304	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Glucokinase/transcriptional regulator, RpiR family, fusion; Belongs to the bacterial glucokinase family.	0.897
AKU10757.1	pgi	AzCIB_0852	AzCIB_1267	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.971
AKU10757.1	tal	AzCIB_0852	AzCIB_3155	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.	0.998
AKU10757.1	zwf	AzCIB_0852	AzCIB_1264	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.	0.916
AKU10806.1	AKU10757.1	AzCIB_0901	AzCIB_0852	Phosphoglucomutase.	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	0.929
AKU10806.1	AKU11166.1	AzCIB_0901	AzCIB_1261	Phosphoglucomutase.	Aldehyde dehydrogenase.	0.819
AKU10806.1	AKU11167.1	AzCIB_0901	AzCIB_1262	Phosphoglucomutase.	4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase.	0.824
AKU10806.1	AKU12558.1	AzCIB_0901	AzCIB_2665	Phosphoglucomutase.	Aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.	0.903
AKU10806.1	AKU13328.1	AzCIB_0901	AzCIB_3435	Phosphoglucomutase.	Hydroxypyruvate reductase.	0.800
AKU10806.1	glk	AzCIB_0901	AzCIB_1304	Phosphoglucomutase.	Glucokinase/transcriptional regulator, RpiR family, fusion; Belongs to the bacterial glucokinase family.	0.942
AKU10806.1	pgi	AzCIB_0901	AzCIB_1267	Phosphoglucomutase.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.930
AKU10806.1	tal	AzCIB_0901	AzCIB_3155	Phosphoglucomutase.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.	0.831
AKU10806.1	zwf	AzCIB_0901	AzCIB_1264	Phosphoglucomutase.	Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.	0.845
AKU11166.1	AKU10757.1	AzCIB_1261	AzCIB_0852	Aldehyde dehydrogenase.	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	0.835
AKU11166.1	AKU10806.1	AzCIB_1261	AzCIB_0901	Aldehyde dehydrogenase.	Phosphoglucomutase.	0.819
AKU11166.1	AKU11167.1	AzCIB_1261	AzCIB_1262	Aldehyde dehydrogenase.	4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase.	0.977
AKU11166.1	AKU12558.1	AzCIB_1261	AzCIB_2665	Aldehyde dehydrogenase.	Aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.	0.803