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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12587.1ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. (182 aa)    
Predicted Functional Partners:
AKU12586.1
Hypothetical protein.
       0.719
ubiX
UbiX-like carboxylase subunit encoded in anaerobic phenol operon; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.709
AKU12584.1
UbiD-like carboxylase subunit encoded in anaerobic phenol operon; Belongs to the UbiD family.
       0.686
AKU12583.1
Phenylphosphate carboxylase, delta subunit.
       0.507
AKU12582.1
Phenylphosphate carboxylase, alpha subunit; Belongs to the UbiD family.
       0.503
AKU12581.1
Phenylphosphate carboxylase, gamma subunit.
       0.452
AKU13003.1
Hypothetical protein.
 
  
 0.419
AKU12588.1
phenylacetate-CoA ligase.
       0.407
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.404
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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