STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12609.1Putative prolyl cis-trans isomerase. (250 aa)    
Predicted Functional Partners:
AKU12608.1
Fusion of ABC transporter-type transmembrane and ATP binding protein.
 
  
 0.941
AKU12611.1
Hypothetical protein.
 
    0.925
AKU12610.1
Type I secretion protein.
 
     0.923
AKU12607.1
Sigma-54 dependent transcriptional regulator.
 
   
 0.816
AKU13374.1
Hypothetical protein.
  
     0.675
AKU12612.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
   
 0.594
AKU12617.1
Serine/threonine protein kinase.
  
  
 0.589
AKU11194.1
Putative DNA-binding protein with PD1-like DNA-binding motif protein.
  
     0.586
AKU11558.1
Exopolysaccharide biosynthesis protein.
 
   0.538
AKU12818.1
Ap4A phosphorylase II.
  
     0.510
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.