Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12611.1Hypothetical protein. (826 aa)    
Predicted Functional Partners:
AKU12610.1
Type I secretion protein.
 
     0.950
AKU12609.1
Putative prolyl cis-trans isomerase.
 
    0.925
AKU12608.1
Fusion of ABC transporter-type transmembrane and ATP binding protein.
 
 
 0.923
AKU12617.1
Serine/threonine protein kinase.
 
 
 
 0.810
AKU12607.1
Sigma-54 dependent transcriptional regulator.
 
     0.767
AKU11759.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.760
AKU12612.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
    0.753
AKU11041.1
Hypothetical protein.
   
 
 0.739
AKU13374.1
Hypothetical protein.
  
     0.704
AKU10866.1
Flagellar motor switch protein.
  
 
 0.650
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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