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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12625.1feruloyl-CoA synthase. (622 aa)    
Predicted Functional Partners:
AKU12624.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.858
AKU12626.1
Extracellular ligand-binding receptor.
 
   
 0.803
boxC
Benzoyl-CoA-dihydrodiol lyase.
 
 
 0.787
boxB
Benzoyl-CoA oxygenase component B.
  
     0.721
AKU12623.1
Beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.703
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
    
 
 0.640
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
    
 
 0.640
boxR
Transcriptional regulator; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
  
 0.639
bzdR
BzdR; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
 
  
 0.638
AKU12429.1
Cytochrome P450.
 
 0.601
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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