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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12639.1Aminotransferase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (426 aa)    
Predicted Functional Partners:
AKU12641.1
Putative FeS assembly ATPase SufC.
 
  
 0.989
AKU12642.1
Cysteine desulfurase.
 
 
 0.987
AKU12638.1
Iron sulfur cluster assembly protein SufU.
 
 0.986
AKU12640.1
Putative Fe-S assembly protein.
 
 
 0.986
AKU12973.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
 
 0.924
selD
Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP.
   
 0.909
AKU12637.1
Iron sulfur cluster assembly protein (SufT).
 
  
 0.907
AKU11714.1
Cysteine desulfurase (SufS); Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
  
 
0.902
AKU11689.1
NifU-like protein.
 
 0.897
AKU12663.1
Scaffold protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
  
 0.856
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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