Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AKU12686.1Positive regulator of sigma(E), RseC/MucC. (157 aa)    
Predicted Functional Partners:
AKU12687.1
Sigma factor regulatory protein.
  
  
 0.959
AKU12688.1
Anti sigma-E protein.
 
  
 0.888
AKU12684.1
Hypothetical protein.
       0.821
AKU12685.1
Serine protease; Belongs to the peptidase S1C family.
  
  
 0.815
AKU12689.1
RNA polymerase sigma factor RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.790
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
     
 0.688
AKU11665.1
Hypothetical protein.
  
     0.681
AKU14037.1
Hypothetical protein.
  
     0.672
AKU10786.1
Hypothetical protein.
  
     0.661
AKU10476.1
Hypothetical protein.
  
     0.642
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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