| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKU09932.1 | AKU10132.1 | AzCIB_0027 | AzCIB_0227 | Excinuclease ABC subunit A. | DNA polymerase III, epsilon subunit. | 0.804 |
| AKU09932.1 | AKU13106.1 | AzCIB_0027 | AzCIB_3213 | Excinuclease ABC subunit A. | DNA-dependent helicase II. | 0.458 |
| AKU09932.1 | mfd | AzCIB_0027 | AzCIB_2065 | Excinuclease ABC subunit A. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.932 |
| AKU09932.1 | mutL | AzCIB_0027 | AzCIB_3559 | Excinuclease ABC subunit A. | Putative DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.749 |
| AKU09932.1 | ruvA | AzCIB_0027 | AzCIB_0476 | Excinuclease ABC subunit A. | Holliday junction DNA helicase motor protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.667 |
| AKU09932.1 | ruvB | AzCIB_0027 | AzCIB_0475 | Excinuclease ABC subunit A. | Holliday junction DNA helicase B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.653 |
| AKU09932.1 | uvrA | AzCIB_0027 | AzCIB_4009 | Excinuclease ABC subunit A. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.970 |
| AKU09932.1 | uvrB | AzCIB_0027 | AzCIB_2813 | Excinuclease ABC subunit A. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.994 |
| AKU09932.1 | uvrC | AzCIB_0027 | AzCIB_2781 | Excinuclease ABC subunit A. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.877 |
| AKU10132.1 | AKU09932.1 | AzCIB_0227 | AzCIB_0027 | DNA polymerase III, epsilon subunit. | Excinuclease ABC subunit A. | 0.804 |
| AKU10132.1 | AKU13106.1 | AzCIB_0227 | AzCIB_3213 | DNA polymerase III, epsilon subunit. | DNA-dependent helicase II. | 0.740 |
| AKU10132.1 | mfd | AzCIB_0227 | AzCIB_2065 | DNA polymerase III, epsilon subunit. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.827 |
| AKU10132.1 | mutL | AzCIB_0227 | AzCIB_3559 | DNA polymerase III, epsilon subunit. | Putative DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.841 |
| AKU10132.1 | ruvA | AzCIB_0227 | AzCIB_0476 | DNA polymerase III, epsilon subunit. | Holliday junction DNA helicase motor protein; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.782 |
| AKU10132.1 | ruvB | AzCIB_0227 | AzCIB_0475 | DNA polymerase III, epsilon subunit. | Holliday junction DNA helicase B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.663 |
| AKU10132.1 | uvrA | AzCIB_0227 | AzCIB_4009 | DNA polymerase III, epsilon subunit. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.804 |
| AKU10132.1 | uvrB | AzCIB_0227 | AzCIB_2813 | DNA polymerase III, epsilon subunit. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.975 |
| AKU12705.1 | uvrB | AzCIB_2812 | AzCIB_2813 | Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.827 |
| AKU13106.1 | AKU09932.1 | AzCIB_3213 | AzCIB_0027 | DNA-dependent helicase II. | Excinuclease ABC subunit A. | 0.458 |
| AKU13106.1 | AKU10132.1 | AzCIB_3213 | AzCIB_0227 | DNA-dependent helicase II. | DNA polymerase III, epsilon subunit. | 0.740 |
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