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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12715.1Histone deacetylase family protein. (318 aa)    
Predicted Functional Partners:
atpD
ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.784
AKU12765.1
WD-40 repeat protein.
  
 
 0.705
AKU09971.1
Hypothetical protein.
    
 0.700
AKU09973.1
Hypothetical protein.
  
 
 0.699
AKU13297.1
Hypothetical protein.
 
 
 0.698
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
 0.679
AKU11264.1
Hypothetical protein.
    
 0.674
AKU11282.1
ATPase, AAA family protein.
 
 
 0.666
AKU10304.1
Silent information regulator protein Sir2.
    
 0.651
AKU12963.1
Silent information regulator protein Sir2.
    
 0.651
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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