Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
AKU12718.1Type IV pilus biogenesis protein. (121 aa)    
Predicted Functional Partners:
AKU12719.1
DNA polymerase III, delta prime subunit.
     
 0.842
AKU12717.1
TatD-related deoxyribonuclease.
  
    0.833
mltG
Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
       0.815
AKU14061.1
Type IV fimbrial biogenesis protein.
  
   
 0.812
AKU12240.1
Complex sensory protein.
    
 
 0.811
AKU14058.1
Type IV fimbrial biogenesis protein.
  
   
 0.805
AKU14060.1
Type IV fimbrial biogenesis protein.
  
   
 0.801
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.798
AKU10672.1
Diguanylate cyclase/phosphodiesterase.
    
 
 0.797
AKU10745.1
Hypothetical protein.
    
 
 0.797
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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