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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12740.1Putative regulator of anaerobic phenylacetate metabolism. (318 aa)    
Predicted Functional Partners:
AKU10245.1
Putative ring-hydroxylation complex protein 2.
 
  
 0.759
AKU10243.1
PaaA.
 
  
 0.753
AKU10246.1
Putative ring oxidation complex protein 3.
 
   
 0.748
AKU10241.1
Putative thioesterase PaaI.
 
   
 0.707
AKU10247.1
Ring-hydroxylation complex protein 4.
 
   
 0.685
AKU10244.1
phenylacetate-CoA oxygenase subunit PaaB.
 
   
 0.679
AKU12231.1
PaaZ.
  
  
 0.617
AKU14264.1
N6-adenine-specific DNA methyltransferase, N12 class.
   
    0.583
AKU10239.1
1,2-epoxyphenylacetyl-CoA isomerase PaaG; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.567
AKU11096.1
Aromatic-ring hydroxylase protein conaining monooxygenase FAD-binding domain.
  
     0.561
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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