STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12757.1Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (480 aa)    
Predicted Functional Partners:
AKU12758.1
4-cresol dehydrogenase (Hydroxylating), flavoprotein subunit.
     
 0.797
AKU12760.1
Cytochrome c, class I.
     
 0.658
AKU12759.1
Hypothetical protein.
       0.654
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.617
AKU11828.1
Indole-3-pyruvate decarboxylase.
   
 0.576
AKU12756.1
Putative regulatory protein.
       0.471
AKU14053.1
Glutamate synthase.
  
  
 0.464
AKU12780.1
Pyruvate oxidoreductase.
   
 
 0.457
AKU11760.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.455
AKU10670.1
Bifunctional protein putA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
 
0.447
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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