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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12774.1RND efflux system, outer membrane lipoprotein, NodT family. (464 aa)    
Predicted Functional Partners:
AKU12775.1
Multidrug efflux system protein.
 0.997
AKU12776.1
Acriflavin resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.994
AKU14325.1
Outer membrane efflux protein.
  
  
 0.952
AKU13739.1
Type I secretion outer membrane protein, TolC family.
     
 0.936
AKU13834.1
Hypothetical protein.
  
  
 
0.920
macB
Macrolide export ATP-binding/permease protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.915
AKU13401.1
HlyD-like secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.893
AKU13400.1
Cation/multidrug efflux pump protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.885
AKU11093.1
Hydrophobe/amphiphile efflux-1 family protein.
 0.839
AKU11092.1
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.817
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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