Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU12777.1TetR family transcriptional regulator. (215 aa)    
Predicted Functional Partners:
AKU12776.1
Acriflavin resistance protein A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.681
AKU12775.1
Multidrug efflux system protein.
 
   
 0.654
AKU12774.1
RND efflux system, outer membrane lipoprotein, NodT family.
 
   
 0.641
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
 
    0.489
AKU10833.1
Hypothetical protein.
  
     0.458
AKU12631.1
Transcriptional regulator, TetR family.
  
     0.425
AKU10786.1
Hypothetical protein.
  
     0.424
AKU13565.1
Sulfatase.
  
   
 0.406
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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