Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKU10046.1 | AKU10630.1 | AzCIB_0141 | AzCIB_0725 | ATPase, AAA family protein. | RNA-binding protein Hfq. | 0.465 |
| AKU10046.1 | atpD | AzCIB_0141 | AzCIB_0088 | ATPase, AAA family protein. | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.503 |
| AKU10046.1 | clpP | AzCIB_0141 | AzCIB_2891 | ATPase, AAA family protein. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.404 |
| AKU10046.1 | clpX | AzCIB_0141 | AzCIB_2890 | ATPase, AAA family protein. | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.674 |
| AKU10046.1 | hslV | AzCIB_0141 | AzCIB_4234 | ATPase, AAA family protein. | ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.461 |
| AKU10046.1 | lon | AzCIB_0141 | AzCIB_2889 | ATPase, AAA family protein. | ATP-dependent protease LA; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.627 |
| AKU10046.1 | tig | AzCIB_0141 | AzCIB_2892 | ATPase, AAA family protein. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.472 |
| AKU10630.1 | AKU10046.1 | AzCIB_0725 | AzCIB_0141 | RNA-binding protein Hfq. | ATPase, AAA family protein. | 0.465 |
| AKU10630.1 | clpP | AzCIB_0725 | AzCIB_2891 | RNA-binding protein Hfq. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.644 |
| AKU10630.1 | clpX | AzCIB_0725 | AzCIB_2890 | RNA-binding protein Hfq. | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.820 |
| AKU10630.1 | ftsH | AzCIB_0725 | AzCIB_3005 | RNA-binding protein Hfq. | Protease, ATP-dependent zinc-metallo; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.533 |
| AKU10630.1 | groS | AzCIB_0725 | AzCIB_0773 | RNA-binding protein Hfq. | Chaperonins cpn10 (10 kDa subunit); Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.527 |
| atpD | AKU10046.1 | AzCIB_0088 | AzCIB_0141 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATPase, AAA family protein. | 0.503 |
| atpD | clpP | AzCIB_0088 | AzCIB_2891 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.545 |
| atpD | clpX | AzCIB_0088 | AzCIB_2890 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. | 0.759 |
| atpD | ftsH | AzCIB_0088 | AzCIB_3005 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Protease, ATP-dependent zinc-metallo; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.573 |
| atpD | groS | AzCIB_0088 | AzCIB_0773 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Chaperonins cpn10 (10 kDa subunit); Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.498 |
| atpD | tig | AzCIB_0088 | AzCIB_2892 | ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.636 |
| clpP | AKU10046.1 | AzCIB_2891 | AzCIB_0141 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATPase, AAA family protein. | 0.404 |
| clpP | AKU10630.1 | AzCIB_2891 | AzCIB_0725 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | RNA-binding protein Hfq. | 0.644 |
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