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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12786.1Hypothetical protein. (640 aa)    
Predicted Functional Partners:
AKU12788.1
Hypothetical protein.
 
  
 0.991
AKU12787.1
Hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.989
AKU10940.1
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein.
   
    0.739
AKU12176.1
Hypothetical protein.
   
    0.725
AKU14182.1
Hypothetical protein.
   
    0.725
AKU12798.1
PhoH-related protein.
  
  
 0.558
AKU10041.1
Fructosamine kinase.
   
    0.549
AKU13622.1
Glu/Leu/Phe/Val dehydrogenase dimerization region containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.522
rpoS
RNA polymerase factor sigma-38 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.
  
  
 0.483
AKU11122.1
Trp repressor binding protein.
   
    0.482
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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