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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12795.1Aminotransferase. (440 aa)    
Predicted Functional Partners:
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.920
ilvD-2
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
 
 0.920
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.914
argJ
Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
  
 
 0.913
AKU10323.1
NAD-dependent glutamate dehydrogenase.
  
  
 0.912
AKU12256.1
NAD-dependent glutamate dehydrogenase.
  
  
 0.912
AKU09917.1
L-alanine dehydrogenase; Belongs to the AlaDH/PNT family.
     
 0.909
AKU13644.1
Ornithine cyclodeaminase.
    
 0.909
AKU11820.1
Glutamate dehydrogenase (NAD(P)(+)); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.908
AKU13283.1
Glutamate dehydrogenase (NAD(P)+) oxidoreductase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.908
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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