Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12798.1PhoH-related protein. (468 aa)    
Predicted Functional Partners:
AKU12797.1
Peroxiredoxin.
  
    0.709
AKU12786.1
Hypothetical protein.
  
  
 0.569
AKU12796.1
Hypothetical protein.
 
     0.558
AKU12800.1
DNA polymerase III, epsilon subunit.
       0.516
AKU12799.1
Nucleotidyltransferase.
       0.504
AKU12787.1
Hypothetical protein; Belongs to the UPF0229 family.
   
    0.494
AKU12801.1
Hypothetical protein.
  
  
 0.486
AKU10382.1
Ribonuclease G (RNase G).
  
    0.447
AKU12788.1
Hypothetical protein.
   
    0.429
AKU11787.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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