Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKU12799.1Nucleotidyltransferase. (632 aa)    
Predicted Functional Partners:
AKU12800.1
DNA polymerase III, epsilon subunit.
 
  
 0.985
AKU11235.1
solute:Na+ symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.884
AKU14013.1
Acetate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.757
AKU10683.1
Acetate permease; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.743
AKU12801.1
Hypothetical protein.
     
 0.708
AKU14014.1
Hypothetical protein.
 
  
 0.701
AKU10682.1
Hypothetical protein.
 
  
 0.694
AKU13164.1
Hypothetical protein.
 
     0.615
AKU12608.1
Fusion of ABC transporter-type transmembrane and ATP binding protein.
    
 0.524
AKU12798.1
PhoH-related protein.
       0.504
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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