Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12848.1Hypothetical protein. (231 aa)    
Predicted Functional Partners:
AKU12850.1
Quinohemoprotein amine dehydrogenase, 40kDa subunit.
 
     0.931
AKU12851.1
Quinohemoprotein amine dehydrogenase, gamma subunit.
 
     0.925
AKU12853.1
Quinohemoprotein amine dehydrogenase, 60kDa subunit.
 
    0.917
AKU12852.1
Quinohemoprotein amine dehydrogenase, putative SAM-radical dependent activating subunit.
 
     0.913
AKU12847.1
Hypothetical protein.
 
     0.910
AKU12849.1
ABC efflux transporter, permease/ATP-binding protein.
 
   
 0.848
AKU12846.1
Hypothetical protein.
 
     0.836
AKU11096.1
Aromatic-ring hydroxylase protein conaining monooxygenase FAD-binding domain.
 
    0.688
AKU14021.1
Hypothetical protein.
 
  
 0.672
AKU12854.1
Succinate semialdehyde dehydrogenase [NAD(P)+]; Belongs to the aldehyde dehydrogenase family.
     
 0.544
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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