Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12864.1Radical SAM domain protein. (527 aa)    
Predicted Functional Partners:
AKU12863.1
Hypothetical protein.
       0.775
AKU12005.1
Putative transcriptional activator.
  
  
 0.698
AKU12862.1
Hypothetical protein.
       0.549
AKU11657.1
Hypothetical protein.
  
     0.511
AKU12865.1
Hypothetical protein.
       0.494
AKU10052.1
Hypothetical protein.
  
     0.479
AKU10184.1
Hypothetical protein.
  
     0.432
AKU12984.1
Oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
  
 0.422
AKU10762.1
Hypothetical protein.
   
    0.421
AKU12867.1
Alpha/beta hydrolase fold.
     
 0.420
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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