Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12869.1Hypothetical protein. (289 aa)    
Predicted Functional Partners:
AKU12863.1
Hypothetical protein.
 
     0.829
AKU12868.1
Integral membrane protein.
       0.704
AKU12866.1
O-acetylhomoserine aminocarboxypropyltransferase.
       0.543
AKU12867.1
Alpha/beta hydrolase fold.
       0.543
flgI
Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.531
AKU10855.1
Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
    0.525
AKU10866.1
Flagellar motor switch protein.
 
    0.514
AKU10867.1
Flagellar motor switch protein.
 
    0.513
AKU13817.1
Hypothetical protein.
  
     0.508
AKU10873.1
Flagellar motor switch protein.
  
     0.492
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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