Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKU10784.1 | AKU12917.1 | AzCIB_0879 | AzCIB_3024 | M23 family peptidase. | Hypothetical protein. | 0.495 |
AKU12917.1 | AKU10784.1 | AzCIB_3024 | AzCIB_0879 | Hypothetical protein. | M23 family peptidase. | 0.495 |
AKU12917.1 | AKU12918.1 | AzCIB_3024 | AzCIB_3025 | Hypothetical protein. | Hypothetical protein. | 0.938 |
AKU12917.1 | AKU12919.1 | AzCIB_3024 | AzCIB_3026 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.639 |
AKU12917.1 | AKU12920.1 | AzCIB_3024 | AzCIB_3027 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.604 |
AKU12917.1 | AKU13641.1 | AzCIB_3024 | AzCIB_3748 | Hypothetical protein. | cAMP phosphodiesterase. | 0.677 |
AKU12917.1 | AKU13778.1 | AzCIB_3024 | AzCIB_3885 | Hypothetical protein. | Twitching motility protein. | 0.593 |
AKU12917.1 | AKU14128.1 | AzCIB_3024 | AzCIB_4235 | Hypothetical protein. | Hypothetical protein. | 0.631 |
AKU12917.1 | cysS | AzCIB_3024 | AzCIB_3023 | Hypothetical protein. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.495 |
AKU12917.1 | def-2 | AzCIB_3024 | AzCIB_2885 | Hypothetical protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.534 |
AKU12917.1 | lpxH | AzCIB_3024 | AzCIB_3028 | Hypothetical protein. | UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.528 |
AKU12918.1 | AKU12917.1 | AzCIB_3025 | AzCIB_3024 | Hypothetical protein. | Hypothetical protein. | 0.938 |
AKU12918.1 | AKU12919.1 | AzCIB_3025 | AzCIB_3026 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.742 |
AKU12918.1 | AKU12920.1 | AzCIB_3025 | AzCIB_3027 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.705 |
AKU12918.1 | AKU13641.1 | AzCIB_3025 | AzCIB_3748 | Hypothetical protein. | cAMP phosphodiesterase. | 0.699 |
AKU12918.1 | AKU13778.1 | AzCIB_3025 | AzCIB_3885 | Hypothetical protein. | Twitching motility protein. | 0.541 |
AKU12918.1 | AKU14128.1 | AzCIB_3025 | AzCIB_4235 | Hypothetical protein. | Hypothetical protein. | 0.590 |
AKU12918.1 | cysS | AzCIB_3025 | AzCIB_3023 | Hypothetical protein. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.483 |
AKU12918.1 | lpxH | AzCIB_3025 | AzCIB_3028 | Hypothetical protein. | UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.639 |
AKU12919.1 | AKU12917.1 | AzCIB_3026 | AzCIB_3024 | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Hypothetical protein. | 0.639 |
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