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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12933.1Hypothetical protein. (955 aa)    
Predicted Functional Partners:
AKU14060.1
Type IV fimbrial biogenesis protein.
  
  
 0.837
AKU14059.1
Fimbrial type-IV assembly protein PilO.
  
  
 0.835
AKU14061.1
Type IV fimbrial biogenesis protein.
  
  
 0.800
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.795
AKU14058.1
Type IV fimbrial biogenesis protein.
  
  
 0.793
AKU10623.1
Type IV fimbrial biogenesis protein.
  
   
 0.772
AKU09947.1
Hypothetical protein.
 
   
 0.771
AKU14057.1
Type IV fimbrial biogenesis protein.
  
  
 0.767
AKU12681.1
Hypothetical protein.
  
   
 0.762
AKU13778.1
Twitching motility protein.
  
    0.757
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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