Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12944.1Hypothetical protein. (150 aa)    
Predicted Functional Partners:
AKU11214.1
Hypothetical protein.
  
 
 0.854
AKU11193.1
CBS domain containing protein.
 
   
 0.756
AKU11155.1
Putative signal transduction protein; Contains CBS domains.
  
   
 0.731
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
  
 0.640
AKU12945.1
Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.529
AKU12943.1
acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase).
       0.445
AKU12946.1
Thioredoxin; Belongs to the thioredoxin family.
     
 0.432
AKU11187.1
Putative inosine-5-monophosphate dehydrogenase related protein.
  
   
 0.402
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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