STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12949.1FAD dependent oxidoreductase family protein. (468 aa)    
Predicted Functional Partners:
AKU12950.1
Hypothetical protein.
       0.792
rimO
Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.785
AKU12952.1
Polyhydroxyalkanoate synthesis repressor PhaR.
     
 0.614
AKU11162.1
L-lactate dehydrogenase.
 
 0.566
AKU12873.1
Hydrogen dehydrogenase, alpha subunit.
   
 
 0.514
AKU14480.1
Formate dehydrogenase, NAD(P) reducing, beta subunit.
   
 
 0.514
AKU13227.1
Glycolate oxidase iron-sulfur subunit.
 
 0.490
AKU14053.1
Glutamate synthase.
     
 0.486
ubiA
4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
    
 0.465
AKU10436.1
Fe-S oxidoreductase.
 
 0.457
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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