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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12979.1C-terminal TonB domain conaining protein. (96 aa)    
Predicted Functional Partners:
AKU13831.1
Biopolymer transport protein.
 
 
 0.879
AKU13830.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.868
AKU11561.1
TonB-dependent receptor.
 
 
 0.835
AKU10932.1
Putative TonB-dependent receptor.
  
 
 0.812
AKU13031.1
Biopolymer transport protein.
 
 
 0.809
AKU10424.1
TonB-dependent receptor.
 
 
 
 0.804
AKU14131.1
Biopolymer transport protein ExbD/TolR.
  
 
 0.790
AKU14205.1
Putative TonB-dependent receptor.
 
 
 0.780
AKU13032.1
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.736
AKU10317.1
Putative TonB-dependent receptor.
  
 
 0.735
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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