Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU12988.1Hypothetical protein. (407 aa)    
Predicted Functional Partners:
AKU12987.1
Invasion gene expression up-regulator.
 
     0.862
AKU12986.1
Hypothetical protein.
 
     0.829
AKU10977.1
Nitric oxide dioxygenase; Belongs to the globin family.
  
  
 0.685
AKU12989.1
Transcriptional regulator, Crp/Fnr family.
 
   
 0.645
AKU11224.1
Nitric oxide reductase subunit B; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.557
AKU10220.1
Hypothetical protein.
 
   
 0.514
AKU10299.1
Hypothetical protein.
 
    0.495
AKU11225.1
Nitric-oxide reductase subunit C.
 
  
 0.494
AKU10300.1
Peptidase U32 falily.
 
    0.450
AKU10276.1
Hypothetical protein.
  
     0.443
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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