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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKU12989.1Transcriptional regulator, Crp/Fnr family. (228 aa)    
Predicted Functional Partners:
AKU12304.1
NNR-like transcriptional regulator.
  
     0.691
AKU12988.1
Hypothetical protein.
 
   
 0.641
AKU12987.1
Invasion gene expression up-regulator.
       0.560
AKU12986.1
Hypothetical protein.
       0.553
AKU11264.1
Hypothetical protein.
    
 0.477
AKU10938.1
Hypothetical protein.
  
 0.463
AKU11193.1
CBS domain containing protein.
  
 0.463
AKU11770.1
Hypothetical protein.
  
 0.462
AKU14170.1
Hypothetical protein.
  
 0.462
AKU13446.1
6-pyruvoyltetrahydropterin synthase.
    
  0.439
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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