Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKU12994.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
AKU12995.1
Iron-sulfur 4Fe-4S ferredoxin transmembrane protein.
 
  
 0.954
AKU12993.1
Hypothetical protein.
 
  
 0.909
AKU12996.1
Cytochrome-cbb3 oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.882
AKU12998.1
Cytochrome-cbb3 oxidase subunit II.
 
  
 0.827
AKU12999.1
Cbb3-type cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.810
AKU12997.1
Cytochrome-cbb3 oxidase subunit.
 
   
 0.803
AKU13000.1
Cytochrome oxidase maturation protein.
 
   
 0.793
AKU10292.1
4Fe-4S ferredoxin.
 
  
 0.759
AKU11761.1
Hypothetical protein.
  
     0.718
AKU12983.1
Hypothetical protein.
 
   
 0.717
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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