Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13004.1Hypothetical protein. (220 aa)    
Predicted Functional Partners:
AKU13003.1
Hypothetical protein.
       0.799
AKU13005.1
Two-component system sensor protein.
 
     0.631
AKU10508.1
Hypothetical protein.
  
     0.603
AKU13778.1
Twitching motility protein.
  
     0.578
AKU14177.1
Hypothetical protein.
  
     0.561
AKU11496.1
Hypothetical protein.
 
     0.551
AKU14128.1
Hypothetical protein.
 
     0.551
AKU11656.1
Hypothetical protein.
 
     0.541
AKU13002.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.535
AKU10623.1
Type IV fimbrial biogenesis protein.
  
     0.523
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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