Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKU13005.1Two-component system sensor protein. (343 aa)    
Predicted Functional Partners:
AKU10694.1
Alginate biosynthesis regulatory protein.
 
 
 0.991
AKU10230.1
Periplasmic binding protein/LacI transcriptional regulator.
 
 
 0.843
AKU11772.1
Putative iron binding protein component of ABC iron transporter.
   
   0.726
AKU14604.1
Extracellular solute-binding protein family 1.
   
   0.726
AKU13004.1
Hypothetical protein.
 
     0.631
AKU13008.1
Type 4 fimbrial biogenesis relatedtransmembrane protein.
 
   
 0.612
AKU13009.1
Putative type 4 pilus biogenesis protein.
 
     0.584
AKU13011.1
Putative type 4 pilus biogenesis protein.
 
   
 0.547
AKU13003.1
Hypothetical protein.
       0.537
AKU13006.1
Type IV pilus assembly protein PilE.
     
 0.508
Your Current Organism:
Azoarcus sp. CIB
NCBI taxonomy Id: 198107
Other names: A. sp. CIB
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